Documentation

Technical guides to install and use Linkr.

Getting started

Discover Linkr and start your first project in minutes.

Core concepts

Key concepts to understand how Linkr is organised.

  • Workspace, project, plugin WIP
  • The data pipeline WIP
  • Versioning and collaboration WIP

Preparing data

Describe, load and clean a warehouse before analysis.

  • Schemas WIP
  • Databases WIP
  • Data quality WIP
  • ETL pipelines WIP

Concept mapping

Link local codes to standard vocabularies (OMOP, SNOMED…).

Exploring and analysing

Build cohorts, datasets and analyses.

  • Data catalog WIP
  • Cohorts WIP
  • Patient-level data WIP
  • Datasets WIP
  • Script collections WIP
  • IDE WIP

Presenting

Dashboards and reports to share your results.

  • Dashboards WIP
  • Reports WIP

Collaborating

Wiki, versioning and team collaboration.

  • Wiki WIP
  • Versioning WIP

Administration

Install, configure and run a Linkr instance.

  • Production install WIP
  • Authentication and permissions WIP
  • Configuration WIP
  • Backup and restore WIP

More

Build plugins, release notes, glossary.

  • Build a plugin WIP
  • Release notes WIP
  • Glossary WIP